Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Gm6550-201ENSMUST00000187574 993 ntBASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Gm37857-201ENSMUST00000191784 1199 ntBASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Gm42479-201ENSMUST00000198654 1356 ntBASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb20Q91XZ9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Gm24541-201ENSMUST00000103871 96 ntBASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Gm6443-201ENSMUST00000203599 874 ntBASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Gm19164-201ENSMUST00000210667 640 ntBASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pcdhb20Q91XZ9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb20Q91XZ9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb20Q91XZ9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb20Q91XZ9 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.05■□□□□ 0
Pcdhb20Q91XZ9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 AV026068-213ENSMUST00000223675 1171 ntBASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 AC162940.1-201ENSMUST00000224745 1167 ntBASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb20Q91XZ9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Gm4732-201ENSMUST00000118778 473 ntBASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Gm12350-201ENSMUST00000121208 462 ntBASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Mir5126-201ENSMUST00000175513 77 ntBASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Gm27646-201ENSMUST00000183989 110 ntBASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Gm42516-201ENSMUST00000198691 767 ntBASIC15.04■□□□□ -0
Pcdhb20Q91XZ9 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms