Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.81■□□□□ 0.44
Ddx41Q91VN6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.8■□□□□ 0.44
Ddx41Q91VN6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx41Q91VN6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Psmb5-202ENSMUST00000227257 622 ntBASIC17.79■□□□□ 0.44
Ddx41Q91VN6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx41Q91VN6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.79■□□□□ 0.44
Ddx41Q91VN6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx41Q91VN6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx41Q91VN6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.77■□□□□ 0.44
Ddx41Q91VN6 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx41Q91VN6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx41Q91VN6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx41Q91VN6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx41Q91VN6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx41Q91VN6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx41Q91VN6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx41Q91VN6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ddx41Q91VN6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx41Q91VN6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.77■□□□□ 0.44
Ddx41Q91VN6 Gm18622-201ENSMUST00000219361 595 ntBASIC17.77■□□□□ 0.44
Ddx41Q91VN6 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.77■□□□□ 0.44
Ddx41Q91VN6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx41Q91VN6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx41Q91VN6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ddx41Q91VN6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ddx41Q91VN6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.77■□□□□ 0.43
Ddx41Q91VN6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx41Q91VN6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx41Q91VN6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx41Q91VN6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ddx41Q91VN6 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Gm13036-201ENSMUST00000117799 748 ntBASIC17.76■□□□□ 0.43
Ddx41Q91VN6 Gm11779-201ENSMUST00000118541 368 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms