Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Gm2810-201ENSMUST00000118681 990 ntBASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Gm10253-201ENSMUST00000194270 940 ntBASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Syt7-205ENSMUST00000224135 1557 ntBASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.3□□□□□ -0.28
Cspg4Q8VHY0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Gm8602-201ENSMUST00000184045 607 ntBASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Gm38294-201ENSMUST00000192831 381 ntBASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Gm6973-201ENSMUST00000117080 721 ntBASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Gm2272-201ENSMUST00000194903 582 ntBASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Gm45384-201ENSMUST00000210451 277 ntBASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Cspg4Q8VHY0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms