Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Gm12350-201ENSMUST00000121208 462 ntBASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg1dQ8VE91 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Gm7230-201ENSMUST00000173026 815 ntBASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.39■□□□□ 0.05
Retreg1dQ8VE91 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Gm11780-201ENSMUST00000136880 516 ntBASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Gm27525-201ENSMUST00000184465 107 ntBASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.38■□□□□ 0.05
Retreg1dQ8VE91 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg1dQ8VE91 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg1dQ8VE91 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.37■□□□□ 0.05
Retreg1dQ8VE91 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg1dQ8VE91 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Retreg1dQ8VE91 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg1dQ8VE91 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg1dQ8VE91 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg1dQ8VE91 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg1dQ8VE91 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg1dQ8VE91 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg1dQ8VE91 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg1dQ8VE91 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg1dQ8VE91 Gm1401-201ENSMUST00000122048 772 ntBASIC15.37■□□□□ 0.05
Retreg1dQ8VE91 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.37■□□□□ 0.05
Retreg1dQ8VE91 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.37■□□□□ 0.05
Retreg1dQ8VE91 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms