Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Gm30025-201ENSMUST00000218555 728 ntBASIC12.69□□□□□ -0.38
Nup35Q8R4R6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.69□□□□□ -0.38
Nup35Q8R4R6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nup35Q8R4R6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.68□□□□□ -0.38
Nup35Q8R4R6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nup35Q8R4R6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Efs-202ENSMUST00000227037 2540 ntBASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Gm7367-201ENSMUST00000057611 492 ntBASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Nup35Q8R4R6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nup35Q8R4R6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms