Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc58Q8R3Q6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 Gm10653-202ENSMUST00000139570 835 ntBASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 Mir5122-201ENSMUST00000175004 89 ntBASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.96□□□□□ -0.17
Ccdc58Q8R3Q6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc58Q8R3Q6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc58Q8R3Q6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc58Q8R3Q6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc58Q8R3Q6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc58Q8R3Q6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc58Q8R3Q6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc58Q8R3Q6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc58Q8R3Q6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Gm2274-201ENSMUST00000184539 609 ntBASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc58Q8R3Q6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Gm8520-201ENSMUST00000186517 868 ntBASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc58Q8R3Q6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc58Q8R3Q6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms