Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.35□□□□□ -0.11
Rfc3Q8R323 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfc3Q8R323 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Gm11780-201ENSMUST00000136880 516 ntBASIC14.34□□□□□ -0.11
Rfc3Q8R323 Mir5126-201ENSMUST00000175513 77 ntBASIC14.34□□□□□ -0.11
Rfc3Q8R323 Mir6404-201ENSMUST00000183699 94 ntBASIC14.34□□□□□ -0.11
Rfc3Q8R323 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.34□□□□□ -0.11
Rfc3Q8R323 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rfc3Q8R323 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfc3Q8R323 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.34□□□□□ -0.11
Rfc3Q8R323 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfc3Q8R323 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rfc3Q8R323 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfc3Q8R323 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.33□□□□□ -0.11
Rfc3Q8R323 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfc3Q8R323 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rfc3Q8R323 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rfc3Q8R323 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc3Q8R323 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Gm5364-201ENSMUST00000216789 889 ntBASIC14.33□□□□□ -0.12
Rfc3Q8R323 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc3Q8R323 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfc3Q8R323 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Grk6-207ENSMUST00000225925 2769 ntBASIC14.32□□□□□ -0.12
Rfc3Q8R323 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.32□□□□□ -0.12
Rfc3Q8R323 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.32□□□□□ -0.12
Rfc3Q8R323 Gm6089-201ENSMUST00000197666 938 ntBASIC14.32□□□□□ -0.12
Rfc3Q8R323 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfc3Q8R323 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfc3Q8R323 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.32□□□□□ -0.12
Rfc3Q8R323 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
Rfc3Q8R323 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.32□□□□□ -0.12
Rfc3Q8R323 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rfc3Q8R323 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc3Q8R323 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfc3Q8R323 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 285 ms