Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Zcchc9Q8R1J3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Gm26308-201ENSMUST00000157768 69 ntBASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Zcchc9Q8R1J3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Zcchc9Q8R1J3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Gm11764-201ENSMUST00000120221 623 ntBASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.47■□□□□ 0.07
Zcchc9Q8R1J3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Mir8117-201ENSMUST00000184773 107 ntBASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms