Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.99■□□□□ 0.63
Sf3a1Q8K4Z5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a1Q8K4Z5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a1Q8K4Z5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a1Q8K4Z5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a1Q8K4Z5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Sf3a1Q8K4Z5 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a1Q8K4Z5 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a1Q8K4Z5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a1Q8K4Z5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Sf3a1Q8K4Z5 Mzt1-203ENSMUST00000227948 952 ntBASIC18.98■□□□□ 0.63
Sf3a1Q8K4Z5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Sf3a1Q8K4Z5 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a1Q8K4Z5 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a1Q8K4Z5 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a1Q8K4Z5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sf3a1Q8K4Z5 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sf3a1Q8K4Z5 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Gm18195-201ENSMUST00000207604 706 ntBASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a1Q8K4Z5 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a1Q8K4Z5 Prob1-201ENSMUST00000097619 3021 ntBASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Gm15173-201ENSMUST00000122049 433 ntBASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sf3a1Q8K4Z5 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.94■□□□□ 0.62
Sf3a1Q8K4Z5 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms