Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Gm24589-201ENSMUST00000116692 94 ntBASIC14.67□□□□□ -0.06
Clrn1Q8K445 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.67□□□□□ -0.06
Clrn1Q8K445 Gm8097-201ENSMUST00000117903 829 ntBASIC14.67□□□□□ -0.06
Clrn1Q8K445 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Gm17971-201ENSMUST00000190239 806 ntBASIC14.67□□□□□ -0.06
Clrn1Q8K445 Gm34391-201ENSMUST00000203706 907 ntBASIC14.67□□□□□ -0.06
Clrn1Q8K445 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Clrn1Q8K445 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Clrn1Q8K445 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.66□□□□□ -0.06
Clrn1Q8K445 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.66□□□□□ -0.06
Clrn1Q8K445 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Birc2-201ENSMUST00000054878 378 ntBASIC14.66□□□□□ -0.06
Clrn1Q8K445 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clrn1Q8K445 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.65□□□□□ -0.06
Clrn1Q8K445 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.65□□□□□ -0.06
Clrn1Q8K445 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.65□□□□□ -0.06
Clrn1Q8K445 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.65□□□□□ -0.06
Clrn1Q8K445 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clrn1Q8K445 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Clrn1Q8K445 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Clrn1Q8K445 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Grk6-207ENSMUST00000225925 2769 ntBASIC14.64□□□□□ -0.07
Clrn1Q8K445 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.64□□□□□ -0.07
Clrn1Q8K445 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.64□□□□□ -0.07
Clrn1Q8K445 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Gm27459-201ENSMUST00000184860 107 ntBASIC14.64□□□□□ -0.07
Clrn1Q8K445 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.64□□□□□ -0.07
Clrn1Q8K445 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clrn1Q8K445 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms