Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Gm7367-201ENSMUST00000057611 492 ntBASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgcs1Q8JZK9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgcs1Q8JZK9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgcs1Q8JZK9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgcs1Q8JZK9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgcs1Q8JZK9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgcs1Q8JZK9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgcs1Q8JZK9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Mir3081-201ENSMUST00000175305 84 ntBASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Gm27742-201ENSMUST00000184667 60 ntBASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Gm7977-201ENSMUST00000193787 748 ntBASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgcs1Q8JZK9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgcs1Q8JZK9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmgcs1Q8JZK9 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms