Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Clip4Q8CI96 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.67■□□□□ 0.1
Clip4Q8CI96 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.66■□□□□ 0.1
Clip4Q8CI96 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip4Q8CI96 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip4Q8CI96 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clip4Q8CI96 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.65■□□□□ 0.1
Clip4Q8CI96 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.65■□□□□ 0.1
Clip4Q8CI96 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.65■□□□□ 0.1
Clip4Q8CI96 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.65■□□□□ 0.1
Clip4Q8CI96 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.65■□□□□ 0.1
Clip4Q8CI96 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clip4Q8CI96 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Clip4Q8CI96 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clip4Q8CI96 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Clip4Q8CI96 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.64■□□□□ 0.09
Clip4Q8CI96 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clip4Q8CI96 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clip4Q8CI96 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.63■□□□□ 0.09
Clip4Q8CI96 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clip4Q8CI96 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clip4Q8CI96 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clip4Q8CI96 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clip4Q8CI96 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clip4Q8CI96 Gm15165-201ENSMUST00000118140 502 ntBASIC15.63■□□□□ 0.09
Clip4Q8CI96 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.63■□□□□ 0.09
Clip4Q8CI96 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.63■□□□□ 0.09
Clip4Q8CI96 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms