Protein–RNA interactions for Protein: Q8CCJ3

Ufl1, E3 UFM1-protein ligase 1, mousemouse

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufl1Q8CCJ3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ufl1Q8CCJ3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ufl1Q8CCJ3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.58■□□□□ 0.57
Ufl1Q8CCJ3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ufl1Q8CCJ3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Ufl1Q8CCJ3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ufl1Q8CCJ3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 Gm10499-201ENSMUST00000174094 934 ntBASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ufl1Q8CCJ3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ufl1Q8CCJ3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Gm26308-201ENSMUST00000157768 69 ntBASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Chchd1-203ENSMUST00000224633 557 ntBASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ufl1Q8CCJ3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ufl1Q8CCJ3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ufl1Q8CCJ3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ufl1Q8CCJ3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ufl1Q8CCJ3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ufl1Q8CCJ3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ufl1Q8CCJ3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ufl1Q8CCJ3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ufl1Q8CCJ3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.55■□□□□ 0.56
Ufl1Q8CCJ3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ufl1Q8CCJ3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ufl1Q8CCJ3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ufl1Q8CCJ3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ufl1Q8CCJ3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms