Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
E4f1Q8CCE9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.26■□□□□ 0.51
E4f1Q8CCE9 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.26■□□□□ 0.51
E4f1Q8CCE9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
E4f1Q8CCE9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
E4f1Q8CCE9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
E4f1Q8CCE9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.26■□□□□ 0.51
E4f1Q8CCE9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.26■□□□□ 0.51
E4f1Q8CCE9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
E4f1Q8CCE9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
E4f1Q8CCE9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
E4f1Q8CCE9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
E4f1Q8CCE9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
E4f1Q8CCE9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
E4f1Q8CCE9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
E4f1Q8CCE9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
E4f1Q8CCE9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.25■□□□□ 0.51
E4f1Q8CCE9 Gm25406-201ENSMUST00000157599 105 ntBASIC18.25■□□□□ 0.51
E4f1Q8CCE9 Gm9727-201ENSMUST00000161387 555 ntBASIC18.25■□□□□ 0.51
E4f1Q8CCE9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.25■□□□□ 0.51
E4f1Q8CCE9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.25■□□□□ 0.51
E4f1Q8CCE9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
E4f1Q8CCE9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
E4f1Q8CCE9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
E4f1Q8CCE9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
E4f1Q8CCE9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
E4f1Q8CCE9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
E4f1Q8CCE9 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Gm2756-201ENSMUST00000195851 400 ntBASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
E4f1Q8CCE9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.23■□□□□ 0.51
E4f1Q8CCE9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
E4f1Q8CCE9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
E4f1Q8CCE9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
E4f1Q8CCE9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
E4f1Q8CCE9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
E4f1Q8CCE9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
E4f1Q8CCE9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
E4f1Q8CCE9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
E4f1Q8CCE9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
E4f1Q8CCE9 Gm4995-201ENSMUST00000117247 432 ntBASIC18.22■□□□□ 0.51
E4f1Q8CCE9 Gm7222-201ENSMUST00000117512 906 ntBASIC18.22■□□□□ 0.51
E4f1Q8CCE9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.22■□□□□ 0.51
E4f1Q8CCE9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
E4f1Q8CCE9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
E4f1Q8CCE9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
E4f1Q8CCE9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
E4f1Q8CCE9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms