Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.04■□□□□ -0
SynpoQ8CC35 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.04■□□□□ -0
SynpoQ8CC35 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.04■□□□□ -0
SynpoQ8CC35 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SynpoQ8CC35 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SynpoQ8CC35 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SynpoQ8CC35 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SynpoQ8CC35 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SynpoQ8CC35 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SynpoQ8CC35 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SynpoQ8CC35 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.03■□□□□ -0
SynpoQ8CC35 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.03■□□□□ -0
SynpoQ8CC35 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.03■□□□□ -0
SynpoQ8CC35 Gm7862-201ENSMUST00000121461 292 ntBASIC15.03■□□□□ -0
SynpoQ8CC35 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.03■□□□□ -0
SynpoQ8CC35 Gm6296-201ENSMUST00000222599 943 ntBASIC15.03■□□□□ -0
SynpoQ8CC35 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.03■□□□□ -0
SynpoQ8CC35 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.03■□□□□ -0
SynpoQ8CC35 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.03■□□□□ -0
SynpoQ8CC35 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.03■□□□□ -0
SynpoQ8CC35 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.03■□□□□ -0
SynpoQ8CC35 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SynpoQ8CC35 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SynpoQ8CC35 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SynpoQ8CC35 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SynpoQ8CC35 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.02■□□□□ -0
SynpoQ8CC35 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.02■□□□□ -0
SynpoQ8CC35 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SynpoQ8CC35 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SynpoQ8CC35 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SynpoQ8CC35 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.02■□□□□ -0
SynpoQ8CC35 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.02■□□□□ -0
SynpoQ8CC35 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SynpoQ8CC35 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SynpoQ8CC35 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SynpoQ8CC35 Gm25745-201ENSMUST00000174945 133 ntBASIC15.02■□□□□ -0
SynpoQ8CC35 Gm36967-201ENSMUST00000193814 266 ntBASIC15.02■□□□□ -0
SynpoQ8CC35 Gm2651-201ENSMUST00000203560 838 ntBASIC15.02■□□□□ -0
SynpoQ8CC35 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SynpoQ8CC35 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SynpoQ8CC35 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.02□□□□□ -0.01
SynpoQ8CC35 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
SynpoQ8CC35 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.02□□□□□ -0.01
SynpoQ8CC35 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SynpoQ8CC35 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SynpoQ8CC35 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SynpoQ8CC35 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SynpoQ8CC35 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SynpoQ8CC35 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SynpoQ8CC35 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SynpoQ8CC35 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SynpoQ8CC35 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
SynpoQ8CC35 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SynpoQ8CC35 App-207ENSMUST00000227737 2827 ntBASIC15.02□□□□□ -0.01
SynpoQ8CC35 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SynpoQ8CC35 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SynpoQ8CC35 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15□□□□□ -0.01
SynpoQ8CC35 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15□□□□□ -0.01
SynpoQ8CC35 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15□□□□□ -0.01
SynpoQ8CC35 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SynpoQ8CC35 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SynpoQ8CC35 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15□□□□□ -0.01
SynpoQ8CC35 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15□□□□□ -0.01
SynpoQ8CC35 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SynpoQ8CC35 Gm44357-201ENSMUST00000195897 142 ntBASIC15□□□□□ -0.01
SynpoQ8CC35 Gm19658-201ENSMUST00000196231 138 ntBASIC15□□□□□ -0.01
SynpoQ8CC35 Gm44367-201ENSMUST00000196836 138 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms