Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim4Q8C1Q6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim4Q8C1Q6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim4Q8C1Q6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Smim4Q8C1Q6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.03□□□□□ -0.32
Smim4Q8C1Q6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Smim4Q8C1Q6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim4Q8C1Q6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smim4Q8C1Q6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim4Q8C1Q6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim4Q8C1Q6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smim4Q8C1Q6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim4Q8C1Q6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smim4Q8C1Q6 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smim4Q8C1Q6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smim4Q8C1Q6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smim4Q8C1Q6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim4Q8C1Q6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim4Q8C1Q6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim4Q8C1Q6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim4Q8C1Q6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim4Q8C1Q6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim4Q8C1Q6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim4Q8C1Q6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim4Q8C1Q6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim4Q8C1Q6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Smim4Q8C1Q6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim4Q8C1Q6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smim4Q8C1Q6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smim4Q8C1Q6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Gm6345-202ENSMUST00000180900 204 ntBASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Gm17808-201ENSMUST00000200859 894 ntBASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Smim4Q8C1Q6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Gm29340-201ENSMUST00000188763 3854 ntBASIC13□□□□□ -0.33
Smim4Q8C1Q6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13□□□□□ -0.33
Smim4Q8C1Q6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smim4Q8C1Q6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms