Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Snx17Q8BVL3 Gm27618-201ENSMUST00000183671 60 ntBASIC17.19■□□□□ 0.34
Snx17Q8BVL3 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.19■□□□□ 0.34
Snx17Q8BVL3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Snx17Q8BVL3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Snx17Q8BVL3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Snx17Q8BVL3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Snx17Q8BVL3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Snx17Q8BVL3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Snx17Q8BVL3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snx17Q8BVL3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snx17Q8BVL3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Mir8102-201ENSMUST00000184148 139 ntBASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Gm2423-201ENSMUST00000074863 733 ntBASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snx17Q8BVL3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Snx17Q8BVL3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms