Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cpne3Q8BT60 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cpne3Q8BT60 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Cpne3Q8BT60 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cpne3Q8BT60 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cpne3Q8BT60 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cpne3Q8BT60 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.02■□□□□ -0
Cpne3Q8BT60 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpne3Q8BT60 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cpne3Q8BT60 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cpne3Q8BT60 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cpne3Q8BT60 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpne3Q8BT60 Gm13836-201ENSMUST00000121159 501 ntBASIC15.02■□□□□ -0
Cpne3Q8BT60 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.02■□□□□ -0
Cpne3Q8BT60 Gm6659-201ENSMUST00000174752 547 ntBASIC15.02■□□□□ -0
Cpne3Q8BT60 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpne3Q8BT60 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne3Q8BT60 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne3Q8BT60 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Cpne3Q8BT60 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne3Q8BT60 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne3Q8BT60 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne3Q8BT60 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne3Q8BT60 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne3Q8BT60 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne3Q8BT60 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cpne3Q8BT60 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Asic1-205ENSMUST00000228185 1818 ntBASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne3Q8BT60 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 Gm27528-202ENSMUST00000222916 2012 ntBASIC15□□□□□ -0.01
Cpne3Q8BT60 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cpne3Q8BT60 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15□□□□□ -0.01
Cpne3Q8BT60 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15□□□□□ -0.01
Cpne3Q8BT60 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15□□□□□ -0.01
Cpne3Q8BT60 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15□□□□□ -0.01
Cpne3Q8BT60 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cpne3Q8BT60 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne3Q8BT60 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15□□□□□ -0.01
Cpne3Q8BT60 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15□□□□□ -0.01
Cpne3Q8BT60 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne3Q8BT60 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne3Q8BT60 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cpne3Q8BT60 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne3Q8BT60 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne3Q8BT60 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne3Q8BT60 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne3Q8BT60 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Cpne3Q8BT60 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne3Q8BT60 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne3Q8BT60 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne3Q8BT60 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne3Q8BT60 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne3Q8BT60 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms