Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scfd1Q8BRF7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scfd1Q8BRF7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scfd1Q8BRF7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scfd1Q8BRF7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 Gm27494-201ENSMUST00000184735 189 ntBASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 Gm45612-201ENSMUST00000211320 160 ntBASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.66■□□□□ 0.42
Scfd1Q8BRF7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 Mir1895-201ENSMUST00000122615 79 ntBASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scfd1Q8BRF7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms