Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap4Q8BMK4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Gm17808-201ENSMUST00000200859 894 ntBASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap4Q8BMK4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ckap4Q8BMK4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms