Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Gm7153-201ENSMUST00000117092 455 ntBASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh20Q8BIZ0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Gm15372-201ENSMUST00000120729 834 ntBASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh20Q8BIZ0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms