Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim50Q810I2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim50Q810I2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim50Q810I2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim50Q810I2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trim50Q810I2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.14■□□□□ 0.01
Trim50Q810I2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim50Q810I2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim50Q810I2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.14■□□□□ 0.01
Trim50Q810I2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim50Q810I2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.14■□□□□ 0.01
Trim50Q810I2 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.14■□□□□ 0.01
Trim50Q810I2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim50Q810I2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim50Q810I2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim50Q810I2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim50Q810I2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trim50Q810I2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trim50Q810I2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim50Q810I2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim50Q810I2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim50Q810I2 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.14■□□□□ 0.01
Trim50Q810I2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim50Q810I2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.13■□□□□ 0.01
Trim50Q810I2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim50Q810I2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Trim50Q810I2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim50Q810I2 Gm24589-201ENSMUST00000116692 94 ntBASIC15.13■□□□□ 0.01
Trim50Q810I2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Gm27459-201ENSMUST00000184860 107 ntBASIC15.13■□□□□ 0.01
Trim50Q810I2 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.13■□□□□ 0.01
Trim50Q810I2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.13■□□□□ 0.01
Trim50Q810I2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim50Q810I2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Trim50Q810I2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trim50Q810I2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim50Q810I2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trim50Q810I2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim50Q810I2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.12■□□□□ 0.01
Trim50Q810I2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Trim50Q810I2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim50Q810I2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim50Q810I2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Gm43347-201ENSMUST00000200226 580 ntBASIC15.12■□□□□ 0.01
Trim50Q810I2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim50Q810I2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim50Q810I2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim50Q810I2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim50Q810I2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim50Q810I2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim50Q810I2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim50Q810I2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim50Q810I2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim50Q810I2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim50Q810I2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim50Q810I2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim50Q810I2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim50Q810I2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim50Q810I2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim50Q810I2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim50Q810I2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.11■□□□□ 0.01
Trim50Q810I2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trim50Q810I2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim50Q810I2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim50Q810I2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim50Q810I2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim50Q810I2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim50Q810I2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms