Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.31□□□□□ -0.12
Pif1Q80SX8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pif1Q80SX8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.31□□□□□ -0.12
Pif1Q80SX8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.3□□□□□ -0.12
Pif1Q80SX8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Gm19164-201ENSMUST00000210667 640 ntBASIC14.3□□□□□ -0.12
Pif1Q80SX8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pif1Q80SX8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Gm14701-201ENSMUST00000117156 348 ntBASIC14.29□□□□□ -0.12
Pif1Q80SX8 Gm11025-201ENSMUST00000140773 466 ntBASIC14.29□□□□□ -0.12
Pif1Q80SX8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Gm9682-201ENSMUST00000197505 556 ntBASIC14.29□□□□□ -0.12
Pif1Q80SX8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.29□□□□□ -0.12
Pif1Q80SX8 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.29□□□□□ -0.12
Pif1Q80SX8 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.29□□□□□ -0.12
Pif1Q80SX8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pif1Q80SX8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.28□□□□□ -0.12
Pif1Q80SX8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Auts2-212ENSMUST00000178555 309 ntBASIC14.28□□□□□ -0.12
Pif1Q80SX8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Gm44492-201ENSMUST00000197012 141 ntBASIC14.28□□□□□ -0.12
Pif1Q80SX8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms