Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 Gm18622-201ENSMUST00000219361 595 ntBASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3d21Q7TSG5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Gm8097-201ENSMUST00000117903 829 ntBASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Gm43347-201ENSMUST00000200226 580 ntBASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Gm8655-201ENSMUST00000221159 852 ntBASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3d21Q7TSG5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3d21Q7TSG5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Gm24589-201ENSMUST00000116692 94 ntBASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d21Q7TSG5 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d21Q7TSG5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d21Q7TSG5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d21Q7TSG5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d21Q7TSG5 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Sh3d21Q7TSG5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.97■□□□□ 0.31
Sh3d21Q7TSG5 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d21Q7TSG5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d21Q7TSG5 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sh3d21Q7TSG5 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d21Q7TSG5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sh3d21Q7TSG5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d21Q7TSG5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms