Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Vma21Q78T54 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Vma21Q78T54 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vma21Q78T54 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.67□□□□□ -0.38
Vma21Q78T54 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.67□□□□□ -0.38
Vma21Q78T54 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Vma21Q78T54 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vma21Q78T54 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vma21Q78T54 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Vma21Q78T54 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.66□□□□□ -0.38
Vma21Q78T54 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.66□□□□□ -0.38
Vma21Q78T54 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Vma21Q78T54 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vma21Q78T54 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vma21Q78T54 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.65□□□□□ -0.38
Vma21Q78T54 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Vma21Q78T54 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.65□□□□□ -0.38
Vma21Q78T54 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.65□□□□□ -0.38
Vma21Q78T54 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 Mir6982-201ENSMUST00000184354 68 ntBASIC12.65□□□□□ -0.38
Vma21Q78T54 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.65□□□□□ -0.38
Vma21Q78T54 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Vma21Q78T54 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.65□□□□□ -0.38
Vma21Q78T54 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vma21Q78T54 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vma21Q78T54 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vma21Q78T54 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vma21Q78T54 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vma21Q78T54 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vma21Q78T54 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.64□□□□□ -0.39
Vma21Q78T54 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vma21Q78T54 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.64□□□□□ -0.39
Vma21Q78T54 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vma21Q78T54 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.64□□□□□ -0.39
Vma21Q78T54 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.64□□□□□ -0.39
Vma21Q78T54 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vma21Q78T54 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vma21Q78T54 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Vma21Q78T54 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms