Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sned1Q70E20 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Sned1Q70E20 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sned1Q70E20 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sned1Q70E20 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sned1Q70E20 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sned1Q70E20 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sned1Q70E20 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sned1Q70E20 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.54■□□□□ 0.56
Sned1Q70E20 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sned1Q70E20 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sned1Q70E20 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sned1Q70E20 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sned1Q70E20 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sned1Q70E20 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sned1Q70E20 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sned1Q70E20 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Sned1Q70E20 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sned1Q70E20 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sned1Q70E20 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sned1Q70E20 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sned1Q70E20 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.53■□□□□ 0.56
Sned1Q70E20 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sned1Q70E20 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sned1Q70E20 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sned1Q70E20 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sned1Q70E20 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sned1Q70E20 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sned1Q70E20 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sned1Q70E20 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sned1Q70E20 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.53■□□□□ 0.56
Sned1Q70E20 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sned1Q70E20 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sned1Q70E20 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sned1Q70E20 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC18.52■□□□□ 0.56
Sned1Q70E20 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sned1Q70E20 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sned1Q70E20 Dupd1-202ENSMUST00000224735 548 ntBASIC18.52■□□□□ 0.56
Sned1Q70E20 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sned1Q70E20 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.52■□□□□ 0.56
Sned1Q70E20 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sned1Q70E20 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.52■□□□□ 0.56
Sned1Q70E20 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sned1Q70E20 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC18.52■□□□□ 0.55
Sned1Q70E20 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Sned1Q70E20 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.51■□□□□ 0.55
Sned1Q70E20 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.51■□□□□ 0.55
Sned1Q70E20 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC18.51■□□□□ 0.55
Sned1Q70E20 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.51■□□□□ 0.55
Sned1Q70E20 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.51■□□□□ 0.55
Sned1Q70E20 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.51■□□□□ 0.55
Sned1Q70E20 Mir1897-201ENSMUST00000122581 272 ntBASIC18.51■□□□□ 0.55
Sned1Q70E20 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sned1Q70E20 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC18.51■□□□□ 0.55
Sned1Q70E20 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sned1Q70E20 Gm17150-201ENSMUST00000165577 381 ntBASIC18.51■□□□□ 0.55
Sned1Q70E20 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sned1Q70E20 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sned1Q70E20 Gm38319-201ENSMUST00000194537 1266 ntBASIC18.51■□□□□ 0.55
Sned1Q70E20 Gm46209-201ENSMUST00000217912 553 ntBASIC18.51■□□□□ 0.55
Sned1Q70E20 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.51■□□□□ 0.55
Sned1Q70E20 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sned1Q70E20 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sned1Q70E20 Rassf8-202ENSMUST00000058538 1131 ntBASIC18.51■□□□□ 0.55
Sned1Q70E20 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sned1Q70E20 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.51■□□□□ 0.55
Sned1Q70E20 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sned1Q70E20 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sned1Q70E20 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sned1Q70E20 Gm8131-201ENSMUST00000213783 1570 ntBASIC18.51■□□□□ 0.55
Sned1Q70E20 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sned1Q70E20 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.5■□□□□ 0.55
Sned1Q70E20 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sned1Q70E20 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC18.5■□□□□ 0.55
Sned1Q70E20 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.5■□□□□ 0.55
Sned1Q70E20 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC18.5■□□□□ 0.55
Sned1Q70E20 Gm3436-201ENSMUST00000179930 840 ntBASIC18.5■□□□□ 0.55
Sned1Q70E20 Gm37917-201ENSMUST00000194711 392 ntBASIC18.5■□□□□ 0.55
Sned1Q70E20 Gm16476-201ENSMUST00000221544 139 ntBASIC18.5■□□□□ 0.55
Sned1Q70E20 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sned1Q70E20 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Sned1Q70E20 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.5■□□□□ 0.55
Sned1Q70E20 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sned1Q70E20 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Sned1Q70E20 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sned1Q70E20 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sned1Q70E20 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Sned1Q70E20 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sned1Q70E20 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.5■□□□□ 0.55
Sned1Q70E20 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sned1Q70E20 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sned1Q70E20 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sned1Q70E20 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sned1Q70E20 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sned1Q70E20 Gm15653-201ENSMUST00000119247 907 ntBASIC18.49■□□□□ 0.55
Sned1Q70E20 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC18.49■□□□□ 0.55
Sned1Q70E20 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Sned1Q70E20 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.49■□□□□ 0.55
Sned1Q70E20 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sned1Q70E20 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms