Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm27494-201ENSMUST00000184735 189 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm5312-201ENSMUST00000203728 547 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm22065-201ENSMUST00000103753 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm22066-201ENSMUST00000103761 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm24932-201ENSMUST00000103763 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm24115-201ENSMUST00000103799 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm22190-201ENSMUST00000103827 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm22191-201ENSMUST00000103831 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm24721-201ENSMUST00000103849 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm28018-201ENSMUST00000103869 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm26399-201ENSMUST00000103937 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm25349-201ENSMUST00000177728 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm23616-201ENSMUST00000177797 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm25871-201ENSMUST00000177816 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm24752-201ENSMUST00000178240 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm24496-201ENSMUST00000178287 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm25649-201ENSMUST00000178476 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm25548-201ENSMUST00000178681 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm23147-201ENSMUST00000178841 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm26095-201ENSMUST00000179270 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm22171-201ENSMUST00000179283 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm23936-201ENSMUST00000179354 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm22619-201ENSMUST00000179516 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm25255-201ENSMUST00000179579 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm24755-201ENSMUST00000179691 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm26506-201ENSMUST00000179692 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm25086-201ENSMUST00000179931 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm23243-201ENSMUST00000180047 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm24659-201ENSMUST00000180212 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm24169-201ENSMUST00000180244 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm23689-201ENSMUST00000180354 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm27359-201ENSMUST00000184153 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm27785-201ENSMUST00000184268 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm27466-201ENSMUST00000184396 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm27703-201ENSMUST00000184836 110 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm11185-201ENSMUST00000117732 1007 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm15920-201ENSMUST00000118998 402 ntBASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC5.28□□□□□ -1.56
Syne1Q6ZWR6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms