Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Timd4Q6U7R4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Gm10060-201ENSMUST00000212002 111 ntBASIC14.41□□□□□ -0.1
Timd4Q6U7R4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Timd4Q6U7R4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Timd4Q6U7R4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Timd4Q6U7R4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Timd4Q6U7R4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Timd4Q6U7R4 Gm15173-201ENSMUST00000122049 433 ntBASIC14.4□□□□□ -0.1
Timd4Q6U7R4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Timd4Q6U7R4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Timd4Q6U7R4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.4□□□□□ -0.1
Timd4Q6U7R4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.4□□□□□ -0.1
Timd4Q6U7R4 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.4□□□□□ -0.1
Timd4Q6U7R4 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.4□□□□□ -0.1
Timd4Q6U7R4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Timd4Q6U7R4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Timd4Q6U7R4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Timd4Q6U7R4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Timd4Q6U7R4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Timd4Q6U7R4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Timd4Q6U7R4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Gm7230-201ENSMUST00000173026 815 ntBASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Timd4Q6U7R4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms