Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Grk6-207ENSMUST00000225925 2769 ntBASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Npc1l1Q6T3U4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Prob1-201ENSMUST00000097619 3021 ntBASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Npc1l1Q6T3U4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Gm8318-201ENSMUST00000182954 872 ntBASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Npc1l1Q6T3U4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npc1l1Q6T3U4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npc1l1Q6T3U4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.52■□□□□ 0.55
Npc1l1Q6T3U4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Npc1l1Q6T3U4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Npc1l1Q6T3U4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Npc1l1Q6T3U4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Npc1l1Q6T3U4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.52■□□□□ 0.55
Npc1l1Q6T3U4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Npc1l1Q6T3U4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms