Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Snrnp40Q6PE01 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Gm23547-201ENSMUST00000158210 271 ntBASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Snrnp40Q6PE01 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Gm27437-201ENSMUST00000183429 107 ntBASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Snrnp40Q6PE01 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Snrnp40Q6PE01 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms