Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm44357-201ENSMUST00000195897 142 ntBASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm19658-201ENSMUST00000196231 138 ntBASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm44367-201ENSMUST00000196836 138 ntBASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm44350-201ENSMUST00000197197 138 ntBASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm44390-201ENSMUST00000197533 144 ntBASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm44313-201ENSMUST00000198018 138 ntBASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm44486-201ENSMUST00000198508 138 ntBASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm44314-201ENSMUST00000199263 138 ntBASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm44394-201ENSMUST00000199558 138 ntBASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm44484-201ENSMUST00000199873 138 ntBASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm44466-201ENSMUST00000200264 138 ntBASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm44359-201ENSMUST00000200671 138 ntBASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Sybu-209ENSMUST00000228639 4113 ntBASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Herc4Q6PAV2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Herc4Q6PAV2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Gm7153-201ENSMUST00000117092 455 ntBASIC17.13■□□□□ 0.33
Herc4Q6PAV2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Gm4535-201ENSMUST00000182274 558 ntBASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Gm10355-201ENSMUST00000097146 517 ntBASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Herc4Q6PAV2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Herc4Q6PAV2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms