Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm18056-201ENSMUST00000207670 568 ntBASIC12.68□□□□□ -0.38
Col7a1Q63870 Gm18061-201ENSMUST00000208350 562 ntBASIC12.68□□□□□ -0.38
Col7a1Q63870 Gm18063-201ENSMUST00000208529 568 ntBASIC12.68□□□□□ -0.38
Col7a1Q63870 Gm18052-201ENSMUST00000208750 559 ntBASIC12.68□□□□□ -0.38
Col7a1Q63870 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.68□□□□□ -0.38
Col7a1Q63870 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 Gm15808-201ENSMUST00000119046 604 ntBASIC12.68□□□□□ -0.38
Col7a1Q63870 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Col7a1Q63870 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col7a1Q63870 Gm28911-201ENSMUST00000188837 117 ntBASIC12.68□□□□□ -0.38
Col7a1Q63870 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Col7a1Q63870 Gm6257-201ENSMUST00000163864 910 ntBASIC12.68□□□□□ -0.38
Col7a1Q63870 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 Mir8109-201ENSMUST00000184375 117 ntBASIC12.68□□□□□ -0.38
Col7a1Q63870 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col7a1Q63870 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.68□□□□□ -0.38
Col7a1Q63870 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.68□□□□□ -0.38
Col7a1Q63870 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col7a1Q63870 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.67□□□□□ -0.38
Col7a1Q63870 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Gm14723-201ENSMUST00000118686 215 ntBASIC12.67□□□□□ -0.38
Col7a1Q63870 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.67□□□□□ -0.38
Col7a1Q63870 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.67□□□□□ -0.38
Col7a1Q63870 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.67□□□□□ -0.38
Col7a1Q63870 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.67□□□□□ -0.38
Col7a1Q63870 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Col7a1Q63870 Gm5356-201ENSMUST00000093326 615 ntBASIC12.67□□□□□ -0.38
Col7a1Q63870 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.67□□□□□ -0.38
Col7a1Q63870 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.67□□□□□ -0.38
Col7a1Q63870 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col7a1Q63870 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col7a1Q63870 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col7a1Q63870 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.66□□□□□ -0.38
Col7a1Q63870 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col7a1Q63870 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.66□□□□□ -0.38
Col7a1Q63870 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col7a1Q63870 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col7a1Q63870 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col7a1Q63870 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col7a1Q63870 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col7a1Q63870 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.66□□□□□ -0.38
Col7a1Q63870 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col7a1Q63870 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col7a1Q63870 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col7a1Q63870 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col7a1Q63870 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col7a1Q63870 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.66□□□□□ -0.38
Col7a1Q63870 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.66□□□□□ -0.38
Col7a1Q63870 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col7a1Q63870 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.66□□□□□ -0.38
Col7a1Q63870 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col7a1Q63870 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col7a1Q63870 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Col7a1Q63870 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col7a1Q63870 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Col7a1Q63870 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col7a1Q63870 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Col7a1Q63870 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.65□□□□□ -0.38
Col7a1Q63870 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.65□□□□□ -0.38
Col7a1Q63870 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col7a1Q63870 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.65□□□□□ -0.38
Col7a1Q63870 Gm12341-201ENSMUST00000119724 503 ntBASIC12.65□□□□□ -0.38
Col7a1Q63870 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.65□□□□□ -0.38
Col7a1Q63870 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Col7a1Q63870 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col7a1Q63870 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col7a1Q63870 Gm18753-201ENSMUST00000201000 566 ntBASIC12.65□□□□□ -0.38
Col7a1Q63870 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms