Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim27Q62158 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.06■□□□□ 0.64
Trim27Q62158 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim27Q62158 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim27Q62158 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Trim27Q62158 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim27Q62158 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim27Q62158 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim27Q62158 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim27Q62158 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim27Q62158 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim27Q62158 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim27Q62158 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim27Q62158 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim27Q62158 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim27Q62158 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim27Q62158 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim27Q62158 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim27Q62158 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim27Q62158 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim27Q62158 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim27Q62158 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim27Q62158 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim27Q62158 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim27Q62158 AC154412.1-201ENSMUST00000226540 2786 ntBASIC19.05■□□□□ 0.64
Trim27Q62158 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.05■□□□□ 0.64
Trim27Q62158 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim27Q62158 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim27Q62158 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim27Q62158 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim27Q62158 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trim27Q62158 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim27Q62158 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim27Q62158 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim27Q62158 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim27Q62158 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim27Q62158 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim27Q62158 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim27Q62158 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim27Q62158 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim27Q62158 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim27Q62158 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trim27Q62158 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trim27Q62158 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim27Q62158 Gm7153-201ENSMUST00000117092 455 ntBASIC19.04■□□□□ 0.64
Trim27Q62158 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.04■□□□□ 0.64
Trim27Q62158 Gm8318-201ENSMUST00000182954 872 ntBASIC19.04■□□□□ 0.64
Trim27Q62158 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.04■□□□□ 0.64
Trim27Q62158 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim27Q62158 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Trim27Q62158 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim27Q62158 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim27Q62158 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trim27Q62158 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim27Q62158 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim27Q62158 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim27Q62158 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim27Q62158 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC19.03■□□□□ 0.64
Trim27Q62158 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim27Q62158 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim27Q62158 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim27Q62158 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim27Q62158 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim27Q62158 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Trim27Q62158 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim27Q62158 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trim27Q62158 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim27Q62158 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim27Q62158 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.03■□□□□ 0.64
Trim27Q62158 Gm5682-201ENSMUST00000173402 505 ntBASIC19.03■□□□□ 0.64
Trim27Q62158 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.03■□□□□ 0.64
Trim27Q62158 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.03■□□□□ 0.64
Trim27Q62158 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.03■□□□□ 0.64
Trim27Q62158 Rps4l-201ENSMUST00000071745 943 ntBASIC19.03■□□□□ 0.64
Trim27Q62158 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim27Q62158 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim27Q62158 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trim27Q62158 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trim27Q62158 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Trim27Q62158 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim27Q62158 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
Trim27Q62158 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim27Q62158 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim27Q62158 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim27Q62158 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim27Q62158 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim27Q62158 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim27Q62158 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim27Q62158 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim27Q62158 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim27Q62158 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim27Q62158 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim27Q62158 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trim27Q62158 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim27Q62158 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Trim27Q62158 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.02■□□□□ 0.64
Trim27Q62158 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim27Q62158 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.02■□□□□ 0.64
Trim27Q62158 Gm6376-201ENSMUST00000209407 580 ntBASIC19.02■□□□□ 0.64
Trim27Q62158 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms