Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Gli3Q61602 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gli3Q61602 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Gli3Q61602 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gli3Q61602 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gli3Q61602 Gm42853-201ENSMUST00000201273 1387 ntBASIC20.73■□□□□ 0.91
Gli3Q61602 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC20.72■□□□□ 0.91
Gli3Q61602 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Gli3Q61602 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gli3Q61602 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gli3Q61602 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gli3Q61602 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gli3Q61602 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gli3Q61602 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gli3Q61602 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gli3Q61602 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC20.72■□□□□ 0.91
Gli3Q61602 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC20.72■□□□□ 0.91
Gli3Q61602 AC155252.1-201ENSMUST00000226462 1208 ntBASIC20.72■□□□□ 0.91
Gli3Q61602 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gli3Q61602 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC20.71■□□□□ 0.91
Gli3Q61602 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Gli3Q61602 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gli3Q61602 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gli3Q61602 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gli3Q61602 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Gli3Q61602 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gli3Q61602 Gm27839-201ENSMUST00000184242 106 ntBASIC20.71■□□□□ 0.91
Gli3Q61602 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC20.71■□□□□ 0.91
Gli3Q61602 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gli3Q61602 AC154687.2-201ENSMUST00000223853 640 ntBASIC20.71■□□□□ 0.91
Gli3Q61602 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Gli3Q61602 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC20.71■□□□□ 0.91
Gli3Q61602 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gli3Q61602 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gli3Q61602 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gli3Q61602 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gli3Q61602 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gli3Q61602 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gli3Q61602 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.7■□□□□ 0.9
Gli3Q61602 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Gli3Q61602 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gli3Q61602 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Gli3Q61602 Gm29310-201ENSMUST00000185468 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm21825-201ENSMUST00000185728 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm29109-201ENSMUST00000185895 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm21896-201ENSMUST00000186520 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm21873-201ENSMUST00000186728 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm21794-201ENSMUST00000187056 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm21880-201ENSMUST00000187275 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm21826-201ENSMUST00000187451 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm21198-201ENSMUST00000188393 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm21749-201ENSMUST00000189343 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm21901-201ENSMUST00000189568 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm29424-201ENSMUST00000189716 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm28599-201ENSMUST00000189838 694 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm21867-201ENSMUST00000189917 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm29269-201ENSMUST00000190087 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm21722-201ENSMUST00000190153 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm28423-201ENSMUST00000190701 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm21899-201ENSMUST00000190745 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm21910-201ENSMUST00000191163 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm21849-201ENSMUST00000191571 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm28678-201ENSMUST00000191593 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm20910-201ENSMUST00000193268 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Gm21871-201ENSMUST00000194621 696 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gli3Q61602 Gm19220-201ENSMUST00000222682 803 ntBASIC20.7■□□□□ 0.9
Gli3Q61602 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gli3Q61602 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gli3Q61602 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gli3Q61602 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gli3Q61602 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gli3Q61602 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gli3Q61602 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC20.69■□□□□ 0.9
Gli3Q61602 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gli3Q61602 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gli3Q61602 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Gli3Q61602 Gm7172-201ENSMUST00000218047 1152 ntBASIC20.69■□□□□ 0.9
Gli3Q61602 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gli3Q61602 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Gli3Q61602 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gli3Q61602 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.69■□□□□ 0.9
Gli3Q61602 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.69■□□□□ 0.9
Gli3Q61602 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC20.69■□□□□ 0.9
Gli3Q61602 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gli3Q61602 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gli3Q61602 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gli3Q61602 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gli3Q61602 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.69■□□□□ 0.9
Gli3Q61602 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gli3Q61602 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gli3Q61602 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Gli3Q61602 Gm28911-201ENSMUST00000188837 117 ntBASIC20.68■□□□□ 0.9
Gli3Q61602 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Gli3Q61602 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gli3Q61602 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gli3Q61602 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Gli3Q61602 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gli3Q61602 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gli3Q61602 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms