Protein–RNA interactions for Protein: Q61165

Slc9a1, Sodium/hydrogen exchanger 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a1Q61165 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc9a1Q61165 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc9a1Q61165 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc9a1Q61165 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.51■□□□□ 0.39
Slc9a1Q61165 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc9a1Q61165 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Slc9a1Q61165 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc9a1Q61165 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc9a1Q61165 AV026068-213ENSMUST00000223675 1171 ntBASIC17.5■□□□□ 0.39
Slc9a1Q61165 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc9a1Q61165 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc9a1Q61165 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc9a1Q61165 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Slc9a1Q61165 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc9a1Q61165 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc9a1Q61165 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Slc9a1Q61165 Gm8318-201ENSMUST00000182954 872 ntBASIC17.49■□□□□ 0.39
Slc9a1Q61165 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.49■□□□□ 0.39
Slc9a1Q61165 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.49■□□□□ 0.39
Slc9a1Q61165 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc9a1Q61165 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.49■□□□□ 0.39
Slc9a1Q61165 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc9a1Q61165 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc9a1Q61165 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.49■□□□□ 0.39
Slc9a1Q61165 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc9a1Q61165 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc9a1Q61165 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc9a1Q61165 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc9a1Q61165 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.48■□□□□ 0.39
Slc9a1Q61165 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.48■□□□□ 0.39
Slc9a1Q61165 Gm37153-201ENSMUST00000193637 231 ntBASIC17.48■□□□□ 0.39
Slc9a1Q61165 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.48■□□□□ 0.39
Slc9a1Q61165 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Asic1-205ENSMUST00000228185 1818 ntBASIC17.47■□□□□ 0.39
Slc9a1Q61165 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Gm12350-201ENSMUST00000121208 462 ntBASIC17.47■□□□□ 0.39
Slc9a1Q61165 Gm2651-201ENSMUST00000203560 838 ntBASIC17.47■□□□□ 0.39
Slc9a1Q61165 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Slc9a1Q61165 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 170.8 ms