Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC22.14■■□□□ 1.14
Ptch1Q61115 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ptch1Q61115 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ptch1Q61115 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ptch1Q61115 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ptch1Q61115 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
Ptch1Q61115 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ptch1Q61115 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ptch1Q61115 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ptch1Q61115 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ptch1Q61115 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ptch1Q61115 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC22.14■■□□□ 1.13
Ptch1Q61115 Cd63-ps-201ENSMUST00000145417 875 ntBASIC22.14■■□□□ 1.13
Ptch1Q61115 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC22.14■■□□□ 1.13
Ptch1Q61115 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ptch1Q61115 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ptch1Q61115 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ptch1Q61115 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ptch1Q61115 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ptch1Q61115 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC22.13■■□□□ 1.13
Ptch1Q61115 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Ptch1Q61115 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptch1Q61115 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptch1Q61115 Gm44832-201ENSMUST00000208849 2303 ntBASIC22.13■■□□□ 1.13
Ptch1Q61115 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptch1Q61115 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptch1Q61115 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC22.13■■□□□ 1.13
Ptch1Q61115 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptch1Q61115 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptch1Q61115 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptch1Q61115 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptch1Q61115 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC22.13■■□□□ 1.13
Ptch1Q61115 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Ptch1Q61115 AC131743.5-201ENSMUST00000220775 1618 ntBASIC22.13■■□□□ 1.13
Ptch1Q61115 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC22.13■■□□□ 1.13
Ptch1Q61115 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC22.13■■□□□ 1.13
Ptch1Q61115 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ptch1Q61115 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC22.13■■□□□ 1.13
Ptch1Q61115 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptch1Q61115 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptch1Q61115 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptch1Q61115 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Ptch1Q61115 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ptch1Q61115 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptch1Q61115 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptch1Q61115 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptch1Q61115 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptch1Q61115 Mir6420-201ENSMUST00000185032 102 ntBASIC22.12■■□□□ 1.13
Ptch1Q61115 AC090659.2-201ENSMUST00000225378 1186 ntBASIC22.12■■□□□ 1.13
Ptch1Q61115 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptch1Q61115 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC22.12■■□□□ 1.13
Ptch1Q61115 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ptch1Q61115 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptch1Q61115 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ptch1Q61115 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC22.11■■□□□ 1.13
Ptch1Q61115 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptch1Q61115 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC22.11■■□□□ 1.13
Ptch1Q61115 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC22.11■■□□□ 1.13
Ptch1Q61115 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptch1Q61115 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptch1Q61115 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC22.11■■□□□ 1.13
Ptch1Q61115 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptch1Q61115 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ptch1Q61115 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptch1Q61115 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptch1Q61115 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptch1Q61115 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ptch1Q61115 Gm44729-201ENSMUST00000206759 2052 ntBASIC22.11■■□□□ 1.13
Ptch1Q61115 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Ptch1Q61115 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Ptch1Q61115 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch1Q61115 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Ptch1Q61115 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch1Q61115 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC22.1■■□□□ 1.13
Ptch1Q61115 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch1Q61115 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch1Q61115 Gm43630-201ENSMUST00000201550 776 ntBASIC22.1■■□□□ 1.13
Ptch1Q61115 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC22.1■■□□□ 1.13
Ptch1Q61115 CT009510.1-201ENSMUST00000227972 270 ntBASIC22.1■■□□□ 1.13
Ptch1Q61115 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch1Q61115 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch1Q61115 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch1Q61115 Gm43294-201ENSMUST00000202850 2490 ntBASIC22.1■■□□□ 1.13
Ptch1Q61115 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch1Q61115 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch1Q61115 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ptch1Q61115 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch1Q61115 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch1Q61115 Gm9115-201ENSMUST00000120192 1348 ntBASIC22.09■■□□□ 1.13
Ptch1Q61115 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch1Q61115 Rarb-207ENSMUST00000225921 2756 ntBASIC22.09■■□□□ 1.13
Ptch1Q61115 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Ptch1Q61115 Mir1938-201ENSMUST00000158746 100 ntBASIC22.09■■□□□ 1.13
Ptch1Q61115 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch1Q61115 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch1Q61115 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch1Q61115 Gm20445-201ENSMUST00000061905 565 ntBASIC22.09■■□□□ 1.13
Ptch1Q61115 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ptch1Q61115 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
Ptch1Q61115 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms