Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Vps54Q5SPW0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Gm14140-201ENSMUST00000119999 995 ntBASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Gm8318-201ENSMUST00000182954 872 ntBASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps54Q5SPW0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Gm14722-201ENSMUST00000118943 689 ntBASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Gm27300-201ENSMUST00000184085 97 ntBASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Gm27335-201ENSMUST00000184758 97 ntBASIC18.59■□□□□ 0.57
Vps54Q5SPW0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps54Q5SPW0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps54Q5SPW0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
Vps54Q5SPW0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Vps54Q5SPW0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps54Q5SPW0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps54Q5SPW0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps54Q5SPW0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.58■□□□□ 0.57
Vps54Q5SPW0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps54Q5SPW0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps54Q5SPW0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps54Q5SPW0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps54Q5SPW0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps54Q5SPW0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.58■□□□□ 0.56
Vps54Q5SPW0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.58■□□□□ 0.56
Vps54Q5SPW0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps54Q5SPW0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps54Q5SPW0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps54Q5SPW0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps54Q5SPW0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps54Q5SPW0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.58■□□□□ 0.56
Vps54Q5SPW0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps54Q5SPW0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps54Q5SPW0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps54Q5SPW0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps54Q5SPW0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms