Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Gm12151-201ENSMUST00000121374 290 ntBASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc85aQ5SP85 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Gm27437-201ENSMUST00000183429 107 ntBASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 AC154532.1-201ENSMUST00000227860 965 ntBASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc85aQ5SP85 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ccdc85aQ5SP85 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ccdc85aQ5SP85 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc85aQ5SP85 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc85aQ5SP85 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc85aQ5SP85 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc85aQ5SP85 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc85aQ5SP85 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc85aQ5SP85 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 Gm10154-201ENSMUST00000084445 354 ntBASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc85aQ5SP85 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms