Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gm8825-201ENSMUST00000182565 998 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gm4518-201ENSMUST00000182638 718 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gm7977-201ENSMUST00000193787 748 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Grk6-207ENSMUST00000225925 2769 ntBASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trav5d-4Q5R1F6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Gm25745-201ENSMUST00000174945 133 ntBASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5d-4Q5R1F6 Asic1-205ENSMUST00000228185 1818 ntBASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Gm27357-201ENSMUST00000183754 135 ntBASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Gm9172-201ENSMUST00000212092 954 ntBASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5d-4Q5R1F6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms