Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf43Q5NCP0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Thap2-203ENSMUST00000218989 527 ntBASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf43Q5NCP0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf43Q5NCP0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf43Q5NCP0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf43Q5NCP0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Rnf43Q5NCP0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.77■□□□□ 0.11
Rnf43Q5NCP0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf43Q5NCP0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf43Q5NCP0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Rnf43Q5NCP0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf43Q5NCP0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf43Q5NCP0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf43Q5NCP0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf43Q5NCP0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Gm11745-201ENSMUST00000121669 448 ntBASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Mir6990-201ENSMUST00000183724 91 ntBASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
Rnf43Q5NCP0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf43Q5NCP0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms