Protein–RNA interactions for Protein: Q3V3V9

Carmil2, Capping protein, Arp2/3 and myosin-I linker protein 2, mousemouse

Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil2Q3V3V9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Carmil2Q3V3V9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Carmil2Q3V3V9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Carmil2Q3V3V9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.37■□□□□ 0.37
Carmil2Q3V3V9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Carmil2Q3V3V9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Carmil2Q3V3V9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Carmil2Q3V3V9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Gm25990-201ENSMUST00000102440 86 ntBASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Carmil2Q3V3V9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Gm25745-201ENSMUST00000174945 133 ntBASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Carmil2Q3V3V9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Gm14701-201ENSMUST00000117156 348 ntBASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Gm15173-201ENSMUST00000122049 433 ntBASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Carmil2Q3V3V9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Carmil2Q3V3V9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Carmil2Q3V3V9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Carmil2Q3V3V9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Carmil2Q3V3V9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Carmil2Q3V3V9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Carmil2Q3V3V9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Carmil2Q3V3V9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Carmil2Q3V3V9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Carmil2Q3V3V9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.33■□□□□ 0.37
Carmil2Q3V3V9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Carmil2Q3V3V9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Carmil2Q3V3V9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Carmil2Q3V3V9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Carmil2Q3V3V9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Carmil2Q3V3V9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Carmil2Q3V3V9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Carmil2Q3V3V9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Carmil2Q3V3V9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Carmil2Q3V3V9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.33■□□□□ 0.36
Carmil2Q3V3V9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Carmil2Q3V3V9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Carmil2Q3V3V9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Carmil2Q3V3V9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Carmil2Q3V3V9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Carmil2Q3V3V9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Carmil2Q3V3V9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Carmil2Q3V3V9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Carmil2Q3V3V9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms