Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ckap2Q3V1H1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.78■□□□□ 0.44
Ckap2Q3V1H1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Gm9682-201ENSMUST00000197505 556 ntBASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ckap2Q3V1H1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.77■□□□□ 0.43
Ckap2Q3V1H1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
Ckap2Q3V1H1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ckap2Q3V1H1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ckap2Q3V1H1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Ckap2Q3V1H1 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ckap2Q3V1H1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ckap2Q3V1H1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Mir5126-201ENSMUST00000175513 77 ntBASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Ckap2Q3V1H1 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ckap2Q3V1H1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ckap2Q3V1H1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms