Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Brf2Q3UAW9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Gm17807-201ENSMUST00000186869 298 ntBASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Gm7977-201ENSMUST00000193787 748 ntBASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Gm7367-201ENSMUST00000057611 492 ntBASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brf2Q3UAW9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brf2Q3UAW9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Gm12895-201ENSMUST00000122214 226 ntBASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brf2Q3UAW9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms