Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctdnep1Q3TP92 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Gm27459-201ENSMUST00000184860 107 ntBASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Ctdnep1Q3TP92 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctdnep1Q3TP92 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Gm13418-201ENSMUST00000119097 944 ntBASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctdnep1Q3TP92 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms