Protein–RNA interactions for Protein: Q3TMP1

Gtf3c3, General transcription factor IIIC, polypeptide 3, mousemouse

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c3Q3TMP1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gtf3c3Q3TMP1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c3Q3TMP1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c3Q3TMP1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.82■□□□□ 0.6
Gtf3c3Q3TMP1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c3Q3TMP1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.82■□□□□ 0.6
Gtf3c3Q3TMP1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c3Q3TMP1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c3Q3TMP1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c3Q3TMP1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c3Q3TMP1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c3Q3TMP1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf3c3Q3TMP1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Gtf3c3Q3TMP1 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 AC153366.2-201ENSMUST00000219461 1984 ntBASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gtf3c3Q3TMP1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 Gm43509-201ENSMUST00000196551 2594 ntBASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 Gm30025-201ENSMUST00000218555 728 ntBASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gtf3c3Q3TMP1 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Mir1668-201ENSMUST00000184114 107 ntBASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gtf3c3Q3TMP1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gtf3c3Q3TMP1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms