Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccbe1Q3MI99 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Gm12896-201ENSMUST00000118430 226 ntBASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Gm24841-201ENSMUST00000158676 357 ntBASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Gm26524-201ENSMUST00000192339 390 ntBASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Rab3c-203ENSMUST00000224180 967 ntBASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccbe1Q3MI99 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccbe1Q3MI99 Gm10138-203ENSMUST00000206952 366 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms