Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Thumpd3P97770 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Thumpd3P97770 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Thumpd3P97770 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Thumpd3P97770 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.84■□□□□ 0.13
Thumpd3P97770 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Thumpd3P97770 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Thumpd3P97770 Gm7153-201ENSMUST00000117092 455 ntBASIC15.84■□□□□ 0.13
Thumpd3P97770 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.84■□□□□ 0.13
Thumpd3P97770 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.84■□□□□ 0.13
Thumpd3P97770 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.84■□□□□ 0.13
Thumpd3P97770 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Thumpd3P97770 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Thumpd3P97770 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Thumpd3P97770 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Thumpd3P97770 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.84■□□□□ 0.13
Thumpd3P97770 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Thumpd3P97770 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Thumpd3P97770 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Thumpd3P97770 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Thumpd3P97770 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.84■□□□□ 0.13
Thumpd3P97770 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Thumpd3P97770 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.84■□□□□ 0.13
Thumpd3P97770 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Thumpd3P97770 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Thumpd3P97770 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Thumpd3P97770 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Thumpd3P97770 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Thumpd3P97770 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Thumpd3P97770 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Thumpd3P97770 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Thumpd3P97770 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Thumpd3P97770 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Thumpd3P97770 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.83■□□□□ 0.12
Thumpd3P97770 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Thumpd3P97770 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.83■□□□□ 0.12
Thumpd3P97770 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Thumpd3P97770 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Thumpd3P97770 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Thumpd3P97770 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Thumpd3P97770 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Thumpd3P97770 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Thumpd3P97770 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Thumpd3P97770 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Thumpd3P97770 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Thumpd3P97770 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Thumpd3P97770 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Thumpd3P97770 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd3P97770 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd3P97770 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd3P97770 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd3P97770 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd3P97770 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd3P97770 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd3P97770 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.82■□□□□ 0.12
Thumpd3P97770 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Thumpd3P97770 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd3P97770 Gm7461-201ENSMUST00000058918 827 ntBASIC15.82■□□□□ 0.12
Thumpd3P97770 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd3P97770 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd3P97770 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd3P97770 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd3P97770 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.82■□□□□ 0.12
Thumpd3P97770 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd3P97770 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Thumpd3P97770 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.82■□□□□ 0.12
Thumpd3P97770 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd3P97770 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd3P97770 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Thumpd3P97770 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd3P97770 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Thumpd3P97770 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd3P97770 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd3P97770 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Thumpd3P97770 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Thumpd3P97770 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd3P97770 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.81■□□□□ 0.12
Thumpd3P97770 Olfr129-201ENSMUST00000122318 993 ntBASIC15.81■□□□□ 0.12
Thumpd3P97770 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.81■□□□□ 0.12
Thumpd3P97770 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd3P97770 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.81■□□□□ 0.12
Thumpd3P97770 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd3P97770 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd3P97770 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd3P97770 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd3P97770 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd3P97770 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Thumpd3P97770 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Thumpd3P97770 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Thumpd3P97770 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Thumpd3P97770 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd3P97770 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd3P97770 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Thumpd3P97770 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd3P97770 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd3P97770 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd3P97770 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd3P97770 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd3P97770 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd3P97770 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms