Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SgcaP82350 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SgcaP82350 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.03□□□□□ -0.32
SgcaP82350 Gm12527-201ENSMUST00000117967 564 ntBASIC13.03□□□□□ -0.32
SgcaP82350 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
SgcaP82350 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.03□□□□□ -0.32
SgcaP82350 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.03□□□□□ -0.32
SgcaP82350 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.03□□□□□ -0.32
SgcaP82350 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SgcaP82350 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SgcaP82350 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
SgcaP82350 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SgcaP82350 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SgcaP82350 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SgcaP82350 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
SgcaP82350 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SgcaP82350 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SgcaP82350 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.02□□□□□ -0.32
SgcaP82350 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
SgcaP82350 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SgcaP82350 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
SgcaP82350 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
SgcaP82350 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SgcaP82350 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SgcaP82350 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SgcaP82350 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SgcaP82350 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.02□□□□□ -0.33
SgcaP82350 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.02□□□□□ -0.33
SgcaP82350 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcaP82350 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcaP82350 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.02□□□□□ -0.33
SgcaP82350 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcaP82350 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcaP82350 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcaP82350 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SgcaP82350 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SgcaP82350 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SgcaP82350 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcaP82350 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
SgcaP82350 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SgcaP82350 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.02□□□□□ -0.33
SgcaP82350 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcaP82350 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcaP82350 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SgcaP82350 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SgcaP82350 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
SgcaP82350 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.01□□□□□ -0.33
SgcaP82350 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SgcaP82350 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.01□□□□□ -0.33
SgcaP82350 Timm23-208ENSMUST00000226683 750 ntBASIC13.01□□□□□ -0.33
SgcaP82350 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SgcaP82350 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.01□□□□□ -0.33
SgcaP82350 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.01□□□□□ -0.33
SgcaP82350 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SgcaP82350 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SgcaP82350 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.01□□□□□ -0.33
SgcaP82350 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms