Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Six5P70178 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Six5P70178 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Six5P70178 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Six5P70178 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Six5P70178 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Six5P70178 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.55□□□□□ -0.08
Six5P70178 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Six5P70178 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.54□□□□□ -0.08
Six5P70178 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.54□□□□□ -0.08
Six5P70178 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Six5P70178 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Rps4l-201ENSMUST00000071745 943 ntBASIC14.54□□□□□ -0.08
Six5P70178 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Six5P70178 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Six5P70178 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.53□□□□□ -0.08
Six5P70178 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.53□□□□□ -0.08
Six5P70178 Gm15358-201ENSMUST00000119249 520 ntBASIC14.53□□□□□ -0.08
Six5P70178 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.53□□□□□ -0.08
Six5P70178 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.53□□□□□ -0.08
Six5P70178 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.53□□□□□ -0.08
Six5P70178 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Six5P70178 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Six5P70178 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Six5P70178 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Six5P70178 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Six5P70178 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Six5P70178 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Six5P70178 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Six5P70178 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Six5P70178 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.52□□□□□ -0.08
Six5P70178 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Six5P70178 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Six5P70178 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Six5P70178 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Six5P70178 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.52□□□□□ -0.09
Six5P70178 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.52□□□□□ -0.09
Six5P70178 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six5P70178 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Six5P70178 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Six5P70178 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Six5P70178 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.52□□□□□ -0.09
Six5P70178 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Six5P70178 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
Six5P70178 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Six5P70178 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Six5P70178 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six5P70178 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.52□□□□□ -0.09
Six5P70178 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six5P70178 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.52□□□□□ -0.09
Six5P70178 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six5P70178 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Six5P70178 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Six5P70178 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six5P70178 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.52□□□□□ -0.09
Six5P70178 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six5P70178 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six5P70178 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.52□□□□□ -0.09
Six5P70178 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Six5P70178 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Six5P70178 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.51□□□□□ -0.09
Six5P70178 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Six5P70178 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms