Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lrch1P62046 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lrch1P62046 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Lrch1P62046 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.23■□□□□ 0.51
Lrch1P62046 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lrch1P62046 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.23■□□□□ 0.51
Lrch1P62046 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lrch1P62046 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.23■□□□□ 0.51
Lrch1P62046 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lrch1P62046 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.23■□□□□ 0.51
Lrch1P62046 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.23■□□□□ 0.51
Lrch1P62046 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lrch1P62046 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Lrch1P62046 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Lrch1P62046 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lrch1P62046 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lrch1P62046 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.22■□□□□ 0.51
Lrch1P62046 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Lrch1P62046 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Lrch1P62046 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.22■□□□□ 0.51
Lrch1P62046 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Lrch1P62046 Gm9794-201ENSMUST00000202370 423 ntBASIC18.22■□□□□ 0.51
Lrch1P62046 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lrch1P62046 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.22■□□□□ 0.51
Lrch1P62046 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Lrch1P62046 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lrch1P62046 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.22■□□□□ 0.51
Lrch1P62046 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrch1P62046 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lrch1P62046 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrch1P62046 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Lrch1P62046 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrch1P62046 Gm14719-201ENSMUST00000121891 340 ntBASIC18.21■□□□□ 0.51
Lrch1P62046 Gm38225-201ENSMUST00000194001 393 ntBASIC18.21■□□□□ 0.51
Lrch1P62046 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrch1P62046 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.21■□□□□ 0.51
Lrch1P62046 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrch1P62046 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Lrch1P62046 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrch1P62046 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Lrch1P62046 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
Lrch1P62046 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Gm8410-201ENSMUST00000117225 605 ntBASIC18.2■□□□□ 0.5
Lrch1P62046 Gm11543-201ENSMUST00000120758 370 ntBASIC18.2■□□□□ 0.5
Lrch1P62046 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.2■□□□□ 0.5
Lrch1P62046 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.2■□□□□ 0.5
Lrch1P62046 Gm29541-201ENSMUST00000191351 678 ntBASIC18.2■□□□□ 0.5
Lrch1P62046 Gm9063-201ENSMUST00000223299 582 ntBASIC18.2■□□□□ 0.5
Lrch1P62046 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Lrch1P62046 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Lrch1P62046 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrch1P62046 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrch1P62046 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.19■□□□□ 0.5
Lrch1P62046 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.19■□□□□ 0.5
Lrch1P62046 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrch1P62046 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrch1P62046 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Lrch1P62046 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Lrch1P62046 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lrch1P62046 Gm12490-201ENSMUST00000120255 560 ntBASIC18.19■□□□□ 0.5
Lrch1P62046 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lrch1P62046 Gm15487-201ENSMUST00000122373 465 ntBASIC18.19■□□□□ 0.5
Lrch1P62046 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Lrch1P62046 Gm16215-201ENSMUST00000161990 637 ntBASIC18.19■□□□□ 0.5
Lrch1P62046 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Lrch1P62046 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms